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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs56946761 chr6:26527618 A/AAAG ZNF322B chr9:99957633-99961910:- 0.59 10.91 6.9E-25 Box Plot
THCA rs56962067 chr21:18933561 C/CAT CXADRP3 chr18:14477954-14499277:- -0.61 -8.35 7.59E-16 Box Plot
THCA rs56994343 chr11:48896970 G/A FOLH1B chr11:89372395-89431886:+ 0.45 6.51 1.87E-10 Box Plot
THCA rs57006411 chr17:18290278 T/G LOC162632 chr17:16614993-16707819:+ 0.46 8.01 8.72E-15 Box Plot
THCA rs570145 chr17:18284262 G/A LOC162632 chr17:16614993-16707819:+ 0.45 7.89 2.07E-14 Box Plot
THCA rs57033525 chr1:111157218 T/C DLD chr7:107531415-107572175:+ -0.27 -6 3.83E-9 Box Plot
THCA rs57040411 chr10:46072443 CTT/C AGAP7 chr10:51464162-51486327:- 0.36 6.4 3.79E-10 Box Plot
THCA rs57051236 chr14:66697669 T/G ATP6V1D chr14:67761088-67826982:- 0.3 6.61 1.04E-10 Box Plot
THCA rs57055061 chr11:77615428 T/C INTS4L1 chr7:64601603-64694600:+ 0.69 10.61 9.62E-24 Box Plot
THCA rs57056433 chr22:24082112 T/C IGLL3 chr22:25713888-25716191:+ 0.37 6.65 8.27E-11 Box Plot
THCA rs570786 chr11:77507332 G/C INTS4L1 chr7:64601603-64694600:+ 0.42 7.5 3.23E-13 Box Plot
THCA rs57083837 chr8:3240620 ACCACAAAT/A CSMD1 chr8:2792875-4852494:- -0.49 -9.48 1.19E-19 Box Plot
THCA rs57084122 chr1:111156707 T/C DLD chr7:107531415-107572175:+ -0.28 -6.1 2.25E-9 Box Plot
THCA rs57152574 chr2:101179991 C/T LOC285359 chr3:101431278-101432259:+ 0.4 6.79 3.41E-11 Box Plot
THCA rs57159956 chr8:11797068 T/C SGK223 chr8:8175258-8244008:- -0.4 -7.32 1.07E-12 Box Plot